Package: adaptivetau 2.3-2

adaptivetau: Tau-Leaping Stochastic Simulation

Implements adaptive tau leaping to approximate the trajectory of a continuous-time stochastic process as described by Cao et al. (2007) The Journal of Chemical Physics <doi:10.1063/1.2745299> (aka. the Gillespie stochastic simulation algorithm). This package is based upon work supported by NSF DBI-0906041 and NIH K99-GM104158 to Philip Johnson and NIH R01-AI049334 to Rustom Antia.

Authors:Philip Johnson [aut, cre]

adaptivetau_2.3-2.tar.gz
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adaptivetau_2.3-2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
adaptivetau/json (API)

# Install 'adaptivetau' in R:

install.packages('adaptivetau', repos = c('https://plfjohnson.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/plfjohnson/adaptivetau/issues

Uses libs:

openblas– Optimized BLAS
c++– GNU Standard C++ Library v3

On CRAN:

openblas cpp

6.68 score 1 stars 2 packages 161 scripts 838 downloads 10 mentions 3 exports 0 dependencies

Last updated from:8f4768b8f2. Checks:13 OK. Indexed: yes.

Target	Result	Time
linux-devel-arm64	OK	148
linux-devel-x86_64	OK	108
source / vignettes	OK	140
linux-release-arm64	OK	110
linux-release-x86_64	OK	112
macos-release-arm64	OK	77
macos-release-x86_64	OK	177
macos-oldrel-arm64	OK	67
macos-oldrel-x86_64	OK	175
windows-devel	OK	99
windows-release	OK	73
windows-oldrel	OK	69
wasm-release	OK	91

Exports:ssa.adaptivetau ssa.exact ssa.maketrans

Dependencies:

adaptivetau examples

Rendered fromadaptivetau.Rnwusingutils::Sweave

Last update: 2014-11-19
Started: 2012-04-09

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Approximate stochastic simulation algorithm	adaptivetau ssa.adaptivetau
Exact stochastic simulation algorithm	ssa.exact
Make transition matrix	ssa.maketrans